scRNA

Cluster GSEA example


Patient data

  • Cluster marker genes GSEA using Gene Ontology
  • Use gene counts only (w/o expression)

GSEA by cluster marker genes (0.2)

  • Total clusters : 14 (cluster 0 ~ cluster 13)

Each tab includes the followings:

  • GSEA (BP)
  • GSEA (MF)
  • GSEA (CC)
  • GSEA (data table)

Cluster 0

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6

Cluster 7

Cluster 8

Cluster 9

Cluster 10

Cluster 11

Cluster 12

Cluster 13